Homolog cluster 103889

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Cluster Confidence Rank: 1

Predicted homologs in this cluster with positive TF judgements in TFCat

Number of annotated entries: 166


Gene description Gene taxonomy Gene judgment Protein family
Alx1 216285alx homeobox 1DNA-Binding: sequence-specificTF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Arx 11878aristaless related homeobox gene (drosophila)DNA-Binding: sequence-specificTF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Barhl1 54422barh-like 1 (drosophila)Transcription Factor Binding: tf co-factor bindingTF Gene Candidate
Barx1 12022barh-like homeobox 1DNA-Binding: sequence-specificTF Gene Candidate1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Barx2 12023barh-like homeobox 2DNA-Binding: sequence-specificTF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Cdx1 12590caudal type homeo box 1DNA-Binding: sequence-specificTF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Cdx2 12591caudal type homeo box 2DNA-Binding: sequence-specificTF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Crx 12951cone-rod homeobox containing geneDNA-Binding: sequence-specificTF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Cux1 13047cut-like homeobox 1DNA-Binding: sequence-specificTF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Cux2 13048cut-like homeobox 2DNA-Binding: sequence-specificTF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Dbx1 13172developing brain homeobox 1Indeterminate - There is no evidence for or against this gene's role as a TF
Dlx2 13392distal-less homeobox 2DNA-Binding: sequence-specificTF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Dlx3 13393distal-less homeobox 3DNA-Binding: sequence-specificTF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Dlx4 13394distal-less homeobox 4DNA-Binding: sequence-specificTF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Dlx5 13395distal-less homeobox 5DNA-Binding: sequence-specificTF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Dlx6 13396distal-less homeobox 6DNA-Binding: sequence-specificTF Gene Candidate1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Dmbx1 140477diencephalon/mesencephalon homeobox 1DNA-Binding: sequence-specificTF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Emx1 13796empty spiracles homolog 1 (drosophila)DNA-Binding: sequence-specificTF Gene Candidate1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Emx2 13797empty spiracles homolog 2 (drosophila)DNA-Binding: sequence-specificTF Gene Candidate1.1 Helix-Turn-Helix Group/2 Homeodomain Family
En1 13798engrailed 1DNA-Binding: sequence-specific
Transcription Factor Binding: tf co-factor binding
TF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
En2 13799engrailed 2DNA-Binding: sequence-specific
Transcription Factor Binding: tf co-factor binding
TF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Esx1 13984extraembryonic, spermatogenesis, homeobox 1DNA-Binding: sequence-specificTF Gene Candidate1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Evx2 14029even skipped homeotic gene 2 homologIndeterminate - There is no evidence for or against this gene's role as a TF
Gbx1 231044gastrulation brain homeobox 1Indeterminate - There is no evidence for or against this gene's role as a TF
Gbx2 14472gastrulation brain homeobox 2DNA-Binding: sequence-specificTF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Gsc 14836goosecoid homeoboxDNA-Binding: sequence-specificTF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Gsx1 14842gs homeobox 1DNA-Binding: sequence-specificTF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Gsx2 14843gs homeobox 2DNA-Binding: sequence-specificTF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Hesx1 15209homeo box gene expressed in es cellsDNA-Binding: sequence-specificTF Gene Candidate1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Hhex 15242hematopoietically expressed homeoboxTranscription Factor Binding: tf co-factor bindingTF Gene
Hmx2 15372h6 homeo box 2DNA-Binding: sequence-specificTF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Hnf1a 21405hnf1 homeobox aDNA-Binding: sequence-specificTF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Hnf1b 21410hnf1 homeobox bDNA-Binding: sequence-specificTF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Hoxa10 15395homeo box a10DNA-Binding: sequence-specificTF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Hoxa11 15396homeo box a11DNA-Binding: sequence-specificTF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Hoxa1 15394homeo box a1DNA-Binding: sequence-specific
Transcription Factor Binding: tf co-factor binding
TF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Hoxa2 15399homeo box a2DNA-Binding: sequence-specificTF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Hoxa3 15400homeo box a3DNA-Binding: sequence-specificTF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Hoxa5 15402homeo box a5DNA-Binding: sequence-specificTF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Hoxa7 15404homeo box a7DNA-Binding: sequence-specificTF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Hoxa9 15405homeo box a9DNA-Binding: sequence-specificTF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Hoxb13 15408homeo box b13Transcription Factor Binding: tf co-factor bindingTF Gene
Hoxb1 15407homeo box b1DNA-Binding: sequence-specificTF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Hoxb2 103889homeo box b2DNA-Binding: sequence-specificTF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Hoxb3 15410homeo box b3DNA-Binding: sequence-specificTF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Hoxb4 15412homeo box b4DNA-Binding: sequence-specificTF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Hoxb5 15413homeo box b5DNA-Binding: sequence-specificTF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Hoxb6 15414homeo box b6Indeterminate - There is no evidence for or against this gene's role as a TF
Hoxb7 15415homeo box b7DNA-Binding: sequence-specificTF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
Hoxb8 15416homeo box b8DNA-Binding: sequence-specificTF Gene1.1 Helix-Turn-Helix Group/2 Homeodomain Family
… further results

Other predicted homologs in this cluster that have no TFCat annotation and/or lack PubMed TF evidence
1700123J19Rik
73614
RIKEN cDNA 1700123J19 gene
4933403O03Rik
74399
RIKEN cDNA 4933403O03 gene
Alx3
11694
aristaless 3
Alx4
11695
aristaless 4
Barhl2
104382
BarH-like 2 (Drosophila)
Bsx
244813
brain specific homeobox
Cdx4
12592
caudal type homeo box 4
Cphx
105594
cytoplasmic polyadenylated homeobox
Dbx2
223843
developing brain homeobox 2
Dlx1
13390
distal-less homeobox 1
Duxbl
278672
double homeobox B-like
EG194588
194588
predicted gene, EG194588
EG245263
245263
predicted gene, EG245263
EG434123
434123
predicted gene, EG434123
EG545921
545921
predicted gene, EG545921
EG622311
622311
predicted gene, EG622311
EG638338
638338
predicted gene, EG638338
EG664783
664783
predicted gene, EG664783
EG666312
666312
predicted gene, EG666312
EG666381
666381
predicted gene, EG666381
EG667649
667649
predicted gene, EG667649
EG668814
668814
predicted gene, EG668814
Evx1
14028
even skipped homeotic gene 1 homolog
Gsc2
195333
goosecoid homebox 2
Hlx
15284
H2.0-like homeobox
Hmbox1
219150
homeobox containing 1
Hmx1
15371
H6 homeo box 1
Hmx3
15373
H6 homeo box 3
Homez
239099
homeodomain leucine zipper-encoding gene
Hopx
74318
HOP homeobox
Hoxa13
15398
homeo box A13
Hoxa4
15401
homeo box A4
Hoxa6
15403
homeo box A6
Hoxc13
15422
homeo box C13
Hoxc5
15424
homeo box C5
Hoxc8
15426
homeo box C8
Hoxd11
15431
homeo box D11
Irx2
16372
Iroquois related homeobox 2 (Drosophila)
Isx
71597
intestine specific homeobox
LOC100039213
100039213
hypothetical protein LOC100039213
LOC100039227
100039227
similar to RIKEN cDNA 1110051B16 gene
LOC100039280
100039280
hypothetical protein LOC100039280
LOC100039293
100039293
similar to RIKEN cDNA 1110051B16 gene
LOC100039371
100039371
similar to OBOX4
LOC100039380
100039380
similar to OBOX4
LOC100039399
100039399
similar to OBOX4
LOC100039551
100039551
similar to testis-expressed homeobox protein Tex1
LOC100039620
100039620
similar to reproductive homeobox on X chromosome 11
LOC100042273
100042273
similar to Crx opposite strand transcript 1
LOC100042702
100042702
similar to OBOX4
LOC100042707
100042707
similar to OBOX4
LOC100042711
100042711
similar to OBOX4
LOC100042714
100042714
similar to OBOX4
LOC100042717
100042717
similar to OBOX4
LOC100042721
100042721
similar to OBOX4
LOC100042728
100042728
similar to OBOX4
LOC100042731
100042731
similar to OBOX4
LOC100042735
100042735
similar to OBOX4
LOC100042739
100042739
similar to OBOX4
LOC100042742
100042742
similar to OBOX4
LOC100042753
100042753
similar to OBOX4
LOC100042756
100042756
similar to OBOX4
LOC100042771
100042771
similar to OBOX4
LOC100043090
100043090
similar to Crx opposite strand transcript 1
LOC100044174
100044174
hypothetical protein LOC100044174
LOC100044312
100044312
hypothetical protein LOC100044312
LOC100044313
100044313
hypothetical protein LOC100044313
LOC100044440
100044440
similar to Arx homeoprotein
LOC100044971
100044971
similar to POU domain, class 4, transcription factor 1 (Brain-specific homeobox/POU domain protein 3A) (Brn-3A) (Brn-3.0)
LOC100045013
100045013
similar to ventral anterior homeobox-containing protein 1
LOC100045424
100045424
similar to reproductive homeobox 4C
LOC100045487
100045487
similar to homeodomain transcription factor
LOC100045612
100045612
similar to iroquois-class homeobox protein IRX2
LOC100045995
100045995
similar to oocyte specific homeobox 3
LOC100046032
100046032
similar to brain-2 class III POU-domain protein
LOC100046255
100046255
similar to homeobox protein
LOC100046606
100046606
similar to reproductive homeobox on X chromosome 2
LOC100046712
100046712
similar to reproductive homeobox on X chromosome 11
LOC100046720
100046720
similar to Reproductive homeobox 11
LOC100046899
100046899
similar to Myeloid ecotropic viral integration site-related gene 2
LOC100046906
100046906
similar to reproductive homeobox on X chromosome 2
LOC100047119
100047119
similar to gastrulation brain homeobox 1
LOC100047130
100047130
similar to Crx opposite strand transcript 1
LOC100047506
100047506
similar to PBX3a
LOC100047930
100047930
similar to NK2 transcription factor related, locus 9
LOC100048249
100048249
similar to Crx opposite strand transcript 1
LOC235841
235841
similar to OBOX4
LOC625574
625574
similar to TGFB-induced factor 2
LOC634967
634967
similar to TGFB-induced factor 2
LOC636245
636245
similar to CG32532-PA
LOC666337
666337
similar to OBOX3
LOC672284
672284
similar to homeodomain protein Sax2
LOC673318
673318
similar to reproductive homeobox on X chromosome 2
LOC675809
675809
similar to Homeobox protein SIX2 (Sine oculis homeobox homolog 2)
LOC676870
676870
region containing RIKEN cDNA 2310056B04 gene; pre B-cell leukemia transcription factor 1
Lbx2
16815
ladybird homeobox homolog 2 (Drosophila)
Meis3
17537
Meis homeobox 3
Mkx
210719
mohawk
Mnx1
15285
motor neuron and pancreas homeobox 1
Msx3
17703
homeobox, msh-like 3
Nanogpd
634428
similar to Nanog homeobox
Nkx1-1
20232
NK1 transcription factor related, locus 1 (Drosophila)
Nkx2-2
18088
NK2 transcription factor related, locus 2 (Drosophila)
Nkx2-4
228731
NK2 transcription factor related, locus 4 (Drosophila)
Nkx6-3
74561
NK6 transcription factor related, locus 3 (Drosophila)
OTTMUSG00000017155
665229
predicted gene, OTTMUSG00000017155
Obox1
71468
oocyte specific homeobox 1
Obox3
246791
oocyte specific homeobox 3
Obox5
252829
oocyte specific homeobox 5
Obox6
252830
oocyte specific homeobox 6
Otp
18420
orthopedia homolog (Drosophila)
Otx1
18423
orthodenticle homolog 1 (Drosophila)
Pbx2
18515
pre B-cell leukemia transcription factor 2
Pou1f1
18736
POU domain, class 1, transcription factor 1 (Pit1, growth hormone factor 1)
Pou2f3
18988
POU domain, class 2, transcription factor 3
Pou3f3
18993
POU domain, class 3, transcription factor 3
Pou4f2
18997
POU domain, class 4, transcription factor 2
Pou5f2
75507
POU domain class 5, transcription factor 2
Pou6f2
218030
POU domain, class 6, transcription factor 2
Rhox1
385343
reproductive homeobox 1
Rhox10
434769
reproductive homeobox 10
Rhox12
382282
reproductive homeobox 12
Rhox2a
75199
reproductive homeobox 2A
Rhox2b
100039913
reproductive homeobox 2B
Rhox2c
100039948
reproductive homeobox 2C
Rhox2d
434760
reproductive homeobox 2D
Rhox2e
100040016
reproductive homeobox 2E
Rhox2f
434764
reproductive homeobox 2F
Rhox2g
434766
reproductive homeobox 2G
Rhox2h
622301
reproductive homeobox 2H
Rhox3a
382209
reproductive homeobox 3A
Rhox3f
621852
reproductive homeobox 3F
Rhox3g
546294
reproductive homeobox 3G
Rhox3h
434758
reproductive homeobox 3H
Rhox4a
664609
reproductive homeobox 4A
Rhox4c
434759
reproductive homeobox 4C
Rhox4d
664610
reproductive homeobox 4D
Rhox4f
636177
reproductive homeobox 4F
Rhox4g
664608
reproductive homeobox 4G
Rhox7
547168
reproductive homeobox 7
Shox2
20429
short stature homeobox 2
Six5
20475
sine oculis-related homeobox 5 homolog (Drosophila)
Six6
20476
sine oculis-related homeobox 6 homolog (Drosophila)
Tgif2
228839
TGFB-induced factor 2
Zhx3
320799
zinc fingers and homeoboxes 3
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