Homolog cluster 15289

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Cluster Confidence Rank: 1

Predicted homologs in this cluster with positive TF judgements in TFCat

Number of annotated entries: 30


Gene description Gene taxonomy Gene judgment Protein family
Cic 71722capicua homolog (drosophila)DNA-Binding: sequence-specificTF Gene4 Other Alpha-Helix Group/28 High Mobility Group (Box) Family
Hmgb1 15289high mobility group box 1Transcription Factor Binding: tf co-factor bindingTF Gene
Hmgb2 97165high mobility group box 2DNA-Binding: non-sequence-specific
Transcription Factor Binding: tf co-factor binding
TF Gene4 Other Alpha-Helix Group/28 High Mobility Group (Box) Family
Lef1 16842lymphoid enhancer binding factor 1DNA-Binding: sequence-specificTF Gene4 Other Alpha-Helix Group/28 High Mobility Group (Box) Family
Smarce1 57376swi/snf related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1Transcription Factor Binding: tf co-factor bindingTF Gene
Sox10 20665sry-box containing gene 10DNA-Binding: sequence-specificTF Gene4 Other Alpha-Helix Group/28 High Mobility Group (Box) Family
Sox11 20666sry-box containing gene 11DNA-Binding: sequence-specificTF Gene4 Other Alpha-Helix Group/28 High Mobility Group (Box) Family
Sox13 20668sry-box containing gene 13TF Gene Candidate
Sox14 20669sry-box containing gene 14Indeterminate - There is no evidence for or against this gene's role as a TF
Sox15 20670sry-box containing gene 15DNA-Binding: sequence-specificTF Gene Candidate4 Other Alpha-Helix Group/28 High Mobility Group (Box) Family
Sox17 20671sry-box containing gene 17DNA-Binding: sequence-specificTF Gene4 Other Alpha-Helix Group/28 High Mobility Group (Box) Family
Sox18 20672sry-box containing gene 18DNA-Binding: sequence-specificTF Gene4 Other Alpha-Helix Group/28 High Mobility Group (Box) Family
Sox1 20664sry-box containing gene 1DNA-Binding: sequence-specificTF Gene4 Other Alpha-Helix Group/28 High Mobility Group (Box) Family
Sox21 223227sry-box containing gene 21DNA-Binding: sequence-specificTF Gene4 Other Alpha-Helix Group/28 High Mobility Group (Box) Family
Sox2 20674sry-box containing gene 2DNA-Binding: sequence-specificTF Gene4 Other Alpha-Helix Group/28 High Mobility Group (Box) Family
Sox3 20675sry-box containing gene 3DNA-Binding: sequence-specificTF Gene4 Other Alpha-Helix Group/28 High Mobility Group (Box) Family
Sox4 20677sry-box containing gene 4DNA-Binding: sequence-specificTF Gene Candidate4 Other Alpha-Helix Group/28 High Mobility Group (Box) Family
Sox5 20678sry-box containing gene 5DNA-Binding: sequence-specificTF Gene4 Other Alpha-Helix Group/28 High Mobility Group (Box) Family
Sox6 20679sry-box containing gene 6DNA-Binding: sequence-specificTF Gene4 Other Alpha-Helix Group/28 High Mobility Group (Box) Family
Sox7 20680sry-box containing gene 7DNA-Binding: sequence-specificTF Gene4 Other Alpha-Helix Group/28 High Mobility Group (Box) Family
Sox8 20681sry-box containing gene 8DNA-Binding: sequence-specificTF Gene Candidate4 Other Alpha-Helix Group/28 High Mobility Group (Box) Family
Sox9 20682sry-box containing gene 9DNA-Binding: sequence-specificTF Gene4 Other Alpha-Helix Group/28 High Mobility Group (Box) Family
Sry 21674sex determining region of chr yDNA-Binding: sequence-specificTF Gene
TF Gene Candidate
4 Other Alpha-Helix Group/28 High Mobility Group (Box) Family
Ssrp1 20833structure specific recognition protein 1Transcription Factor Binding: tf co-factor bindingTF Gene
Tcf3 21415transcription factor 3DNA-Binding: sequence-specificTF Gene4 Other Alpha-Helix Group/28 High Mobility Group (Box) Family
Tcf7 21414transcription factor 7, t-cell specificDNA-Binding: sequence-specificTF Gene4 Other Alpha-Helix Group/28 High Mobility Group (Box) Family
Tcf7l2 21416transcription factor 7-like 2, t-cell specific, hmg-boxDNA-Binding: sequence-specific
Transcription Factor Binding: tf co-factor binding
TF Gene
TF Gene Candidate
4 Other Alpha-Helix Group/28 High Mobility Group (Box) Family
Tfam 21780transcription factor a, mitochondrialDNA-Binding: sequence-specificTF Gene4 Other Alpha-Helix Group/28 High Mobility Group (Box) Family
Tox 252838thymocyte selection-associated high mobility group boxIndeterminate - There is no evidence for or against this gene's role as a TF
Ubtf 21429upstream binding transcription factor, rna polymerase iDNA-Binding: sequence-specificTF Gene4 Other Alpha-Helix Group/28 High Mobility Group (Box) Family

Other predicted homologs in this cluster that have no TFCat annotation and/or lack PubMed TF evidence
B020006M18Rik
546118
RIKEN cDNA B020006M18 gene
Bbx
70508
bobby sox homolog (Drosophila)
EG243866
243866
predicted gene, EG243866
EG385454
385454
predicted gene, EG385454
EG432959
432959
predicted gene, EG432959
EG545306
545306
predicted gene, EG545306
EG619937
619937
predicted gene, EG619937
EG626095
634880
predicted gene, EG626095
Gm1815
211895
gene model 1815, (NCBI)
Hbp1
73389
high mobility group box transcription factor 1
Hmg1l1
434174
high-mobility group (nonhistone chromosomal) protein 1-like 1
Hmg20a
66867
high mobility group 20A
Hmg20b
15353
high mobility group 20 B
Hmgb2l1
70823
high mobility group box 2-like 1
Hmgb3
15354
high mobility group box 3
Hmgb4
69317
high-mobility group box 4
LOC100038833
100038833
hypothetical protein LOC100038833
LOC100039851
100039851
similar to Hmgb1 protein
LOC100040996
100040996
similar to diacylglycerol kinase, eta
LOC100041140
100041140
similar to high-mobility group box 1
LOC100041215
100041215
similar to High mobility group protein B2 (High mobility group protein 2) (HMG-2)
LOC100041307
100041307
similar to high-mobility group box 1
LOC100041442
100041442
similar to High mobility group protein B2 (High mobility group protein 2) (HMG-2)
LOC100041700
100041700
similar to High mobility group protein B2 (High mobility group protein 2) (HMG-2)
LOC100042515
100042515
similar to hCG26831
LOC100044152
100044152
hypothetical protein LOC100044152
LOC100044677
100044677
similar to thymus high mobility group box protein TOX
LOC100045714
100045714
similar to high-mobility group box 1
LOC100045876
100045876
similar to high-mobility group box 1
LOC100046847
100046847
similar to hCG26831
LOC100048343
100048343
similar to Hmgb1 protein
LOC546590
546590
similar to High mobility group protein B2 (High mobility group protein 2) (HMG-2)
LOC621858
621858
similar to high-mobility group box 3
LOC625781
625781
similar to HMG-L6
LOC631505
631505
similar to High mobility group protein 4 (HMG-4) (High mobility group protein 2a) (HMG-2a)
LOC637733
637733
similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30)
LOC638585
638585
similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30)
LOC641258
641258
similar to High mobility group protein B2 (High mobility group protein 2) (HMG-2)
LOC676617
676617
hypothetical protein LOC676617
Pms1
227099
postmeiotic segregation increased 1 (S. cerevisiae)
Sox12
20667
SRY-box containing gene 12
Sox30
214105
SRY-box containing gene 30
Tox3
244579
TOX high mobility group box family member 3
Tox4
268741
TOX high mobility group box family member 4
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